Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890002.1_cds_XP_016444668.1_39706
CDS Infomation

[gene=LOC107769926] [db_xref=GeneID:107769926] [protein=probable xyloglucan endotransglucosylase/hydrolase protein] [protein_id=XP_016444668.1] [location=join(14116..14220,14305..14472,24325..24520,24654..24754,24871..25064,26178..26442,27118..27255)] [gbkey=CDS]
Sequence

ATGATACCTCAAACCTTTGTAATCCCCGATGATTCTGATGCCACGAAGTCAACTGTTGAA
GAGTTGGAACAAGTCATACTGATTGAGCATCTACCTGATCGAAAGTCCCACCTTGACGTG
ACAGGGATCCCGCCAAAAATTACCACTCATCGATTGAGCTTGGACGCAAAGTTCAGACCG
GTAAAGCAAAAGAGAAAGTCACAATCCGAGGTTAAGCATGCAGTCATCGAGGATGATGTA
ACCAAACTTCTGAAAATAGGGTCCATTCGGGAGGATAATGGGTATGAAGGGATTTTTAGT
TGGTTTGTTTTGATAAATTTGTCAATACTGGGCAGTTGTGGGGCGCCGAGGAAGGCACTG
GATGTGCCTTTTTGGAACAACTATGAACCCAGTTGGTCCAGTCACCATATCAAGTACCTC
AATGGTGTGGGTGGCACCACAGCTGAGCTTCTTCTTGACAAATCTTCAGGAGCTGGATTT
CAATCAAAGAAATCATATCTATTTGGGCACTTTAGTATGAAAATGAAGCTTGTTGGAGGT
GATTCTGCTGGTGTTGTCTCTGCATTTTATCTGTCATCAAACAACGCAGAACACGATGAG
ATAGATTTTGAATTCCTAGGGAACAGGACAGGTGAGCCATACATATTACAGACCAATGTA
TTTACAGGAGGTAAAGGAGACAGGGAGCAGAGGATCTATCTCTGGTTTGATCCAACCAAC
GACTTCCATTCATATTCCGTTCTCTGGAACACCTTTCAGATTGTGATTTTTGTGGACGAC
GAGTATTCAAGAATTCGAAAGACAGGTGTGGAATTCCCATTCAATCAGCCGATGAAGATC
TATTCAAGCCTGTGGAATGCTGACGACTGGGCTACAAGAGGAGGATTAGAGAAAACGGAT
TGGTCAAAAGCACCATTCACTGCTTCCTACACTTCATTCCACATAGATGGCTGTGAGGCA
GTTACCCCACAAGAAGTGCAAGTTTGTAATACAAATGGCATGAAATGGTGGGATCAAAAG
ACTAGGGGTGCTTTCCAAGAATTAGATGGCCCTCAACATAGAAGACTTCAATGGGTTCGC
CAAAAATACACCATCTATAACTATTGTACAGATAGGAAAAGGTACCCTACCCTTCCTCCA
GAGTGTACCAGGGATAGAGATCTTTAA

Peptide Sequence

PEP ID

XP_016444668.1
PEP Infomation

PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein [Nicotiana tabacum]
Sequence

MIPQTFVIPDDSDATKSTVEELEQVILIEHLPDRKSHLDVTGIPPKITTHRLSLDAKFRP
VKQKRKSQSEVKHAVIEDDVTKLLKIGSIREDNGYEGIFSWFVLINLSILGSCGAPRKAL
DVPFWNNYEPSWSSHHIKYLNGVGGTTAELLLDKSSGAGFQSKKSYLFGHFSMKMKLVGG
DSAGVVSAFYLSSNNAEHDEIDFEFLGNRTGEPYILQTNVFTGGKGDREQRIYLWFDPTN
DFHSYSVLWNTFQIVIFVDDEYSRIRKTGVEFPFNQPMKIYSSLWNADDWATRGGLEKTD
WSKAPFTASYTSFHIDGCEAVTPQEVQVCNTNGMKWWDQKTRGAFQELDGPQHRRLQWVR
QKYTIYNYCTDRKRYPTLPPECTRDRDL

Transcript Sequence

Gene sequence data has not been registered.